Table 1

Species, voucher, locality information, collection date, GenBank accession number and coverage (average, minimum and maximum) of the analyzed specimens. Vouchers annotated as ‘*’ are stored in the CRBE biological collection and vouchers annotated as ‘**’ are stored in the MNHG. Coordinates of each collection site are indicated in Table S1.

Family Species Voucher River basin, site Country Collection date Accession number Coverage
Erythrinidae Hoplerythrinus unitaeniatus GEN5094* Oyapock, French Guiana 2012-10-09 PP754834 124
      Crique Marie       Min: 61
              Max: 656
Erythrinus erythrinus MITA-15-0012* Maroni, 2015-03-13 PP721227 48
      Mitaraka       Min: 25
              Max: 100
Hoplias aimara HYD15-1069* Comte, 2015 PP754828 90
      Roche Fendé       Min: 34
              Max: 130
H. aimara GEN2797* Approuague, 2011-11-10 PP754837 43
      Crique Laboue       Min: 18
              Max: 118
H. aimara GEN4296* Sinnamary, 2012-10-18 PP754835 150
      Crique Saul       Min: 90
              Max: 288
H. aimara GEN3082* Oyapock, 2012-10-22 PP754836 36
      Crique Trois Sauts Aval       Min: 13
              Max: 69
H. intermedius   NA NA NA NC_033860 NA
H. malabaricus GEN2521* Maroni, French Guiana 2012-08-16 PP754838 157
      Crique Grande Waki       Min: 74
              Max: 283
H. malabaricus GEN1380* Mana, 2011-10-28 PP754839 17
      Crique Korossibo       Min: 4
              Max: 33
H. malabaricus GEN5218* Counamama, 2012-10-24 PP754833 554
      Crique Petit       Min: 266
              Max: 863
H. malabaricus   NA NA NA NC_057531 NA
H. malabaricus   NA NA NA AP011992 NA
H. malabaricus GEN5538* Mana, French Guiana 2012-08-29 PP754832 37
      Crique Petit Laussat Aval       Min: 17
              Max: 131
Serrasalmidae Colossoma macropomum   NA NA NA KP188830 NA
Piaractus brachypomus   NA NA NA NC_025315 NA
Piaractus sp.   NA NA NA KM435146 NA
P. mesopotamicus   NA NA NA NC_024940 NA
Metynnis hypsauchen   NA NA NA NC_039113 NA
M. lippincottianus Kaw-METlip-1* Kaw, French Guiana 2018-05-23 PP754827 242
      Amont Kaw       Min: 167
              Max: 828
Pristobrycon striolatus Fl-15-086* Maroni 2015 PP754846 136
              Min: 85
              Max: 196
Pygopristis denticulata SUJM-102** Mapana Creek Suriname 28-10-2007 PP754825 188
              Min: 65
              Max: 256
Pygocentrus nattereri   NA NA NA NC_015840 NA
Serrasalmus rhombeus FL-15-397* Maroni, French Guiana 2015 PP754842 84
      Aval Apatou       Min: 17
              Max: 126
S. eigenmanni Fl-15-053* Maroni 2015 PP754848 219
              Min: 102
              Max: 305
S. eigenmanni 18-G-OYA-52* Oyapock, 2018-10-10 PP754849 502
      Manoa Itou       Min: 329
              Max: 735
Acnodon oligacanthus Fl-15-088* Maroni 2015 PP754845 208
              Min: 161
              Max: 271
Myloplus rhomboidalis FL-15-266* Approuague, 2015 PP754843 87
      Athanase       Min: 40
              Max: 124
M. rhomboidalis FL-15-148* Maroni 2015 PP754844 178
              Min: 45
              Max: 323
M. rhomboidalis HYD15-0221* Mana, 2015 PP754829 111
      Angouleme       Min: 60
              Max: 157
M. rhomboidalis FL-16-231* Sinnamary 2016 PP754841 115
              Min: 70
              Max: 151
M. rubripinnis   NA NA   NC_039115 NA
M. rubripinnis FL-15-071* Maroni French Guiana 2015 PP754847 188
              Min: 100
              Max: 255
M. ternetzi GEN163* Maroni, 2011-10-04 GEN163 353
      Crique Nouvelle France1       Min: 233
              Max: 553
Myleus sp.   NA NA   NC_015751 NA
M. cf. schomburgkii   NA NA   NC_039114 NA
Tometes trilobatus OYA-Chi-12-12* Oyapock, French Guiana 2012-11-15 PP754826 48
      Saut Chien       Min: 25
              Max: 100
T. lebaili GFSU14-141** Maroni 2014-09-23 PP754830 53
      Saut Wayo       Min: 12
              Max: 76
Myloplus planquettei GF15-129** Maroni 2015-11-24 PP754831 187
      Langa Sulu       Min: 38
              Max: 245

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