Open Access
Knowl. Managt. Aquatic Ecosyst.
Number 402, 2011
Eco-Hydro 2010
SER 2010
Article Number 23
Number of page(s) 12
Section SER 2010
Published online 16 January 2012
  • Adán G.E., Álvarez-Lao D., Turrero P., Arbizu M. and García-Vázquez E., 2009. Fish as diet resource in North Spain during the Upper Paleolithic. J. Archaeol. Sci., 36, 895–899. [CrossRef]
  • Ayllon F., Martinez J.L. and Garcia-Vazquez E., 2006. Loss of regional population structure in Atlantic salmon, Salmo salar L., following stocking. ICES J. Mar. Sci., 63, 1269–1273. [CrossRef]
  • Bagliniere J.L., Leclerc G. and Richard A., 1986. Comparison of age and growth determination by scale and otolith reading in sea trout Salmo trutta. Bull. Fr. Pêche Pisci., 301, 56–66. [CrossRef]
  • Beerli P., 2004. Effect of unsampled populations on the estimation of population sizes and migration rates between sampled populations. Mol. Ecol., 13, 827–836. [CrossRef] [PubMed]
  • Beerli P. and Felsenstein J., 2001. Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proc. Natl. Acad. Sci. USA, 98, 4563–4568. [CrossRef]
  • Blanchet S., Páez D.J., Bernatchez L. and Dodson J.J., 2008. An integrated comparison of captive-bred and wild Atlantic salmon (Salmo salar): Implications for supportive breeding programs. Biol. Conserv., 141, 1989–1999. [CrossRef]
  • Budy P. and Schaller H., 2007. Evaluating tributary restoration potential for Pacific salmon recovery. Ecol. Appl., 17, 1068–1086. [CrossRef] [PubMed]
  • Castillo A.G.F, Ayllon F., Moran P., Izquierdo J.I., Martinez J.L., Beall E. and Garcia-Vazquez E., 2008. Interspecific hybridization and introgression are associated with stock transfers in salmonids. Aquaculture, 278, 31–36. [CrossRef]
  • Dillane E., McGinnity P., Coughlan J.P., Cross M.C., De Eyto E., Kenchington E., Prodöhl P. and Cross T.F., 2008. Demographics and landscape features determine intrariver population structure in Atlantic salmon (Salmo salar L.): the case of the River Moy in Ireland. Mol. Ecol., 17, 4786–4800. [CrossRef] [PubMed]
  • Fraser D.J., Hansen M.M., Ostergaard S., Tessier N., Legault M. and Bernatchez L., 2007. Comparative estimation of effective population sizes and temporal gene flow in two contrasting population systems. Mol. Ecol., 16, 3866–3889. [CrossRef] [PubMed]
  • Friedland K.D., MacLean J.C., Hansen L.P., Peyronnet A.J., Karlsson L., Reddin D.G., Maoiléidigh N.Ó. and McCarthy J.L., 2009. The recruitment of Atlantic salmon in Europe. ICES J. Mar. Sci., 66, 289–304. [CrossRef]
  • Garant D., Dodson J.J. and Bernatchez L., 2000. Ecological determinants and temporal stability of the within-river population structure in Atlantic salmon (Salmo salar L.). Mol. Ecol., 9, 615–628. [CrossRef] [PubMed]
  • Garcia de Leaniz C., 2008. Weir removal in salmonid streams: implications, challenges and practicalities. Hydrobiologia, 609, 83–96. [CrossRef]
  • Garcia de Leaniz C., Caballero O., Valero E., Martinez J.J. and Hawkins A.D., 1992. Historical changes in some Spanish rod and line salmon, Salmo salar L., fisheries: why are large multi-sea-winter salmon becoming scarcer? J. Fish Biol., 41, 179. [CrossRef]
  • Garcia-Vazquez E., Morán P. and Pendás A.M., 1991. Chromosome polymorphism patterns indicate failure of a Scottish stock of Salmo salar transplanted into a Spanish river. Can. J. Fish. Aquat. Sci., 48, 170–172. [CrossRef]
  • Gephard S. and McMenemy J., 2004. An overview of the programme to restore Atlantic salmon and other diadromous fishes to the Connecticut River with notes on the current status of these species in the river. Am. Fish. S. M., 9, 287–317.
  • Heggberget T.G., Lund R.A., Ryman N. and Ståhl G., 1986. Growth and genetic variation of Atlantic salmon (Salmo salar) from different sections of the River Alta, north Norway. Can. J. Fish. Aquat. Sci., 43, 1828–1835. [CrossRef]
  • Horreo J.L., Machado-Schiaffino G., Griffiths A., Bright D., Stevens J. and Garcia-Vazquez E., 2008. Identification of differential broodstock contribution affecting genetic variability in hatchery stocks of Atlantic salmon (Salmo salar). Aquaculture, 280, 89–93. [CrossRef]
  • Hurrell R.H. and Price D.J., 1993. Genetic variation in Atlantic salmon, Salmo salar L., within the Tamar catchment in south-west England. J. Fish Biol., 42, 153–156. [CrossRef]
  • Izquierdo J.I., Castillo A.G.F., Ayllon F., de la Hoz J. and Garcia-Vazquez E., 2006. Stock transfers in Spanish brown trout populations: a long-term assessment. Environ. Biol. Fish., 75, 153–157. [CrossRef]
  • Kuparinen A., Tufto J., Consuegra S., Hindar K., Merilä J. and García de Leaniz C., 2010. Effective size of an Atlantic salmon (Salmo salar L.) metapopulation in Northern Spain. Conserv. Genet., 11, 1559–1565. [CrossRef]
  • Lee J.Y., Tada T., Hirono I. and Aoki T., 1998. Molecular cloning and evolution of transferrin cDNAs in salmonids. Mol. Mar. Biol. Biotechnol., 7, 287–329 [PubMed]
  • Machado-Schiaffino G., Dopico E. and Garcia-Vazquez E., 2007. Genetic variation losses in Atlantic salmon stocks created for supportive breeding. Aquaculture, 264, 59–65. [CrossRef]
  • Marshall T.C., 1998. Inbreeding and fitness in wild ungulates, Ph.D. thesis, University of Edinburgh.
  • Moran P., Perez J. and Garcia-Vazquez E., 1998. The malic enzyme in South European Atlantic salmo (Salmo salar); sea age and foreign stocking. Aquat. Sci., 60, 266–359.
  • Moran P., Perez J., Dumas J., Beall E. and Garcia-Vazquez E., 2005. Stocking-related patterns of genetic variation at enzymatic loci in south European Atlantic salmon populations. J. Fish Biol., 67, 186–200. [CrossRef]
  • O'Reilly P.T., Hamilton L.C., McConnell S.K. and Wright J.M., 1996. Rapid analysis of genetic variation in Atlantic salmon (Salmo salar L.) by PCR multiplexing of di-nucleotide and tetra-nucleotide microsatellites. Can. J. Fish. Aquat. Sci., 53, 2292–2298.
  • Parrish D.L., Behnke R.J., Gephard S.R., McCormick S.D. and Reeves G.H., 1998. Why aren´t there more Atlantic salmon (Salmo salar)? Can. J. Fish. Aquat. Sci., 55, 281–287. [CrossRef]
  • Paterson S., Piertney B., Knox D., Gilbey J. and Verspoor E., 2004. Characterization and PCR multiplexing of novel highly variable tetranucleotide Atlantic salmon (Salmo salar L.) microsatellites. Mol. Ecol. Notes, 4, 160–162. [CrossRef]
  • Pendas A.M., Moran P., Martinez J.L. and Garcia-Vazquez E., 1995. Applications of 5S rDNA in Atlantic salmon, brown trout, and in Atlantic salmon x brown trout hybrid identification. Mol. Ecol., 4, 275–276. [CrossRef] [PubMed]
  • Perez J., Martinez J.L., Moran P., Beall E. and Garcia-Vazquez E., 1999. Identification of Atlantic salmon × brown trout hybrids with a nuclear marker useful for evolutionary studies. J. Fish Biol., 54, 460–463.
  • Perez J., Izquierdo J.I., de la Hoz J. and Garcia-Vazquez E., 2005. Female biased angling harvests of Atlantic salmon in Spain. Fish. Res., 74, 127–133. [CrossRef]
  • Primmer C.R., Veselov A.J., Zubchenko A., Poututkin A., Bakhmet I. and Koskinen M.T., 2006. Isolation by distance within a river system: genetic population structuring of Atlantic salmon, Salmo salar, in tributaries of the Varzuga River in northwest Russia. Mol. Ecol., 15, 653–666. [CrossRef] [PubMed]
  • Pritchard J.K., Stephens M. and Donnelly P.J., 2000. Inference of population structure using multilocus genotype data. Genetics, 155, 945–959. [PubMed]
  • Raymond M. and Rousset F., 1995. GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J. Hered., 86, 248–249.
  • Rice W.R., 1989. Analyzing tables of statistical tests. Evolution, 43, 223–225. [CrossRef]
  • Ryman N. and Laikre L., 1991. Effects of supportive breeding on the genetically effective population size. Conserv. Biol., 5, 325. [CrossRef]
  • Schneider S., Roessli D. and Excoffier L., 2000. Arlequin ver. 2000: A software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland.
  • Slettan A., Olsaker I. and Lie Ø., 1995. Atlantic salmon, Salmo salar, microsatellites at the SSOSL25, SSOSL85, SSOSL311, SSOSL417 loci. Anim. Genet., 26, 281–282. [PubMed]
  • Spidle A.P., Kalinowski S.T., Lubinski B.A., Perkins D.L., Beland K.F., Kocik J.F. and King T.L., 2003. Population structure of Atlantic salmon in maine with reference to populations from Atlantic Canada. Trans. Am. Fish. Soc., 132, 196–209. [CrossRef]
  • Ståhl G., 1983. Differences in the amount and distribution of genetic variation between natural populations and hatchery stocks of Atlantic salmon. Aquaculture, 33, 23–32 [CrossRef]
  • Sušnik S., Snoj A., Pohar J. and Dovc P., 1997. The microsatellite marker (BFRO 002) characteristic for different geographically remote brown trout, Salmo trutta L., populations. Anim. Genet., 28, 372. [CrossRef] [PubMed]
  • Vähä J-P., Erkinaro J., Niemelä E. and Primmer C.R., 2007. Life-history and habitat features influence the with-river genetic structure of Atlantic salmon. Mol. Ecol., 16, 2638–2654. [CrossRef] [PubMed]
  • Valiente A.G., Beall E. and Garcia-Vazquez E., 2010. Population genetics of south European Atlantic salmon under global change. Glob. Chang. Biol., 16, 36–47. [CrossRef]
  • Van Oosterhout C., Hutchinson W.F., Wills D.P.M. and Shipley P., 2004. MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes, 4, 535–538. [CrossRef]
  • Vázquez E., Presa P., Sánchez J.A., Blanco G. and Utter F., 1993. Genetic characterization of introduced populations of Atlantic salmon, Salmo salar, in Asturias (Northern Spain). Hereditas, 119, 47–51. [CrossRef]
  • Vespoor E., 1997. Genetic diversity among Atlantic salmon (Salmo salar L.) populations. ICES J. Mar. Sci., 54, 965–973.
  • Verspoor E. and Jordan W.C., 1989. Genetic variation at the Me-2 locus in Atlantic salmon within and between rivers: evidence forits selective maintenance. J. Fish Biol., 35, 205–213. [CrossRef]
  • Whitlock M. C. and McCauley D.E., 1999. Indirect measures of gene flow and migration: F-ST not equal 1/(4Nm+1). Heredity, 82, 117–125. [CrossRef] [PubMed]
  • Wright S., 1951. The genetical structure of populations. Annual Eugenics, 15, 323–354. [CrossRef]